Managing Python Packages and Libraries in Microsoft Fabric Environments

Microsoft Fabric

Python is a powerhouse for data science, analytics, and automation, and Microsoft Fabric brings together a suite of tools to help developers create, run, and manage their Python projects seamlessly. But as any Python developer knows, managing packages and their dependencies can get messy, especially when you’re juggling multiple libraries. In this post, we’ll walk through how Microsoft Fabric approaches Python package management, tackles dependency conflicts, and how you can make the most of its features without the headache.

Fabric environments are designed to simplify how you install and use Python packages, but it is important to understand how they work, as it is not always obvious. When you create or configure a workspace in Fabric, you get a managed environment where you can specify which packages your project needs. Typically, you’ll use a `requirements.txt` file or a similar manifest to declare your dependencies, and Fabric takes care of the installation process behind the scenes. This setup keeps your environment tidy and helps ensure everyone on your team is using the same library versions.

Resolving Dependency Conflicts

One of the frustrating aspects of Python package management is when two libraries require incompatible versions of the same dependency. Fabric addresses this by isolating environments for each project or workspace. That means you can have one environment running pandas 1.x and another with pandas 2.x, without them stepping on each other’s toes.

Fabric also provides tools to scan for dependency conflicts before deployment, giving you a heads-up if there’s a version mismatch that might cause trouble. If you do run into a conflict, you can usually resolve it by updating your requirements or using environment-specific overrides.

Microsoft Fabric handles dependency conflicts in a controlled and layered way because its environments are managed and shared across compute sessions. Here’s how it works:

1. Base Environment is Immutable

  • Fabric starts with a predefined base environment that includes core libraries (e.g., pandas, numpy, pyarrow) pinned to specific versions.
  • These versions are locked to ensure compatibility with Fabric services (Spark, Lakehouse, etc.).

2. User-Level Package Installation

  • When you run:
`%pip install some_package`

Fabric installs the package on top of the base environment in a user-specific layer.

  • If the package requires a different version of a dependency already present, pip tries to resolve it, but:
    • It cannot downgrade or remove base packages.
    • It installs the requested version in the overlay, which can lead to shadowing (your version takes precedence in your session).

3. Conflict Resolution

  • If two libraries require incompatible versions of the same dependency:
    • `pip` will install the latest requested version in the overlay.
    • The first package might break if it strictly depends on the older version.
  • There is no full isolation per notebook—all installs in the same environment affect the session.

4. Best Practices to Avoid Conflicts

  • Use a single requirements file and install all packages together:
`%pip install -r requirements.txt`

This allows pip to resolve dependencies in one go.

  • Pin versions explicitly:
```

pandas==2.2.0

scikit-learn==1.4.0

```
  • For complex projects, build and test your environment locally (using conda or uv) and then replicate it in Fabric.
  • If conflicts persist, consider using Fabric’s Lakehouse with Spark for distributed processing rather than installing conflicting packages.

Best Practices for Package Management in Fabric

  • Pin your package versions: Always specify exact versions in your requirements.txt to avoid surprises.
  • Keep environments isolated: Use separate environments for different projects to prevent conflicts.
  • Regularly update dependencies: Schedule reviews to update packages for bug fixes and security patches.
  • Test your environment: Before deploying, run your code in a staging environment to catch any incompatibilities.
  • Document dependencies: Make sure your team knows which packages are required and why.

Using ‘uv’ in Fabric: Feasibility, Setup, and Usage

Can you use and install `uv` in a Fabric environment? If you are a Python developer, I know that you are thinking about it. The short answer is: not directly.

Microsoft Fabric environments (including Data Engineering, Data Science, and Notebooks) currently use conda-based environments for package management, and they don’t natively support uv (the ultra-fast Python package manager) as a replacement for pip or conda.

Here’s why and what you can do:

  • Why uv isn’t supported yet

Fabric runs on managed compute clusters where the environment is controlled by Microsoft.

You can install additional Python packages using pip install inside a Notebook or via the Environment Settings, but you cannot replace the underlying package manager.

uv requires direct access to the environment and filesystem, which Fabric restricts for stability and security.

  • What you can do

You can install uv as a Python package inside your Fabric Notebook using:

`%pip install uv`

This will allow you to use uv for dependency resolution and lockfile generation in your code, but not for managing the base environment.

For full uv functionality (like creating isolated environments), you’d need a local or self-hosted environment (e.g., VS Code, Azure VM, or container) and then deploy your code to Fabric.

  • Recommended workflow
  1. Use uv locally to manage dependencies and create a `requirements.txt` or `uv.lock`
  2. Upload that file to Fabric and install packages with:
`%pip install -r requirements.txt`
  1. Keep Fabric’s environment lightweight and let uv handle reproducibility outside Fabric.

Alternatives to ‘uv’ for Usage Within Fabric

If ‘uv’ isn’t available in your Fabric environment, don’t worry, there are other solid options. pip remains the default and most widely supported package manager. Poetry offers advanced dependency management and support for virtual environments, making it a favorite for more complex projects. Conda is also popular, especially when you need to manage both Python and non-Python dependencies. Check with your Fabric administrator or the documentation to see which tools are officially supported, and choose the one that best fits your workflow.

Summary and Recommendations

Managing Python packages in Microsoft Fabric doesn’t have to be a headache. By understanding how Fabric environments work, pinning your dependencies, and choosing the right tools, you can keep your projects running smoothly. Whether you stick with pip, try out Poetry, or experiment with ‘uv’ if your environment allows, the key is to stay organized and proactive. Happy coding!


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